TAILIEUCHUNG - Báo cáo khoa học: A strategy for discovery of cancer glyco-biomarkers in serum using newly developed technologies for glycoproteomics

Detection of cancer at early stages that can be treated through surgery is a difficult task. One methodology for cancer biomarker discovery exploits the fact that glycoproteins produced by cancer cells have altered glycan structures, although the proteins themselves are common, ubiquitous, abundant, and familiar. | ỊFEBS Journal REVIEW ARTICLE A strategy for discovery of cancer glyco-biomarkers in serum using newly developed technologies for glycoproteomics Hisashi Narimatsu Hiromichi Sawaki Atsushi Kuno Hiroyuki Kaji Hiromi Ito and Yuzuru Ikehara Research Center for MedicalGlycoscience RCMG National institute of Advanced Industrial science and Technology AIST Tsukuba Japan Keywords biomarker glycan MS glyco-biomarker glycogene glycomics glycoproteomics IGOT JCGGDB lectin microarray qPCR array Correspondence H. Narimatsu Research Center for Medical Glycoscience National institute of Advanced Industrial science and Technology AIST 1-1-1 Umezono Tsukuba Ibaraki 305-8568 Japan Fax 81 298 861 3191 Tel 81 298 861 3200 E-mail Received 24 June 2009 Revised 7 September 2009 accepted 9 October 2009 doi Detection of cancer at early stages that can be treated through surgery is a difficult task. One methodology for cancer biomarker discovery exploits the fact that glycoproteins produced by cancer cells have altered glycan structures although the proteins themselves are common ubiquitous abundant and familiar. However as cancer tissue at the early stage probably constitutes less than 1 of the normal tissue in the relevant organ only 1 of the relevant glycoproteins in the serum should have altered gly-can structures. Here we describe our strategy to approach the detection of these low-level glycoproteins a a quantitative real-time PCR array for glycogenes to predict the glycan structures of secreted glycoproteins b analysis by lectin microarray to select lectins that distinguish cancer-related glycan structures on secreted glycoproteins and c an isotope-coded glycosylation site-specific tagging high-throughput method to identify carrier proteins with the specific lectin epitope. Using this strategy we have identified many glycoproteins containing glycan structures that are altered in cancer cells. These candidate glycoproteins were .

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