TAILIEUCHUNG - Genome-wide characterization and phylogenetic analysis of GSK gene family in three species of cotton: evidence for a role of some GSKs in fiber development and responses to stress

The glycogen synthase kinase 3/shaggy kinase (GSK3) is a serine/threonine kinase with important roles in animals. Although GSK3 genes have been studied for more than 30 years, plant GSK genes have been studied only since the last decade. | Genome-wide characterization and phylogenetic analysis of GSK gene family in three species of cotton evidence for a role of some GSKs in fiber development and responses to stress .den color inherit .ttnd ol .ttnd ul .ttnd dl padding 0 0px 0 20px .ttnd hr margin 10px 0px .ttnd a href javascript void 0 .ttnd a href color inherit dtextscript p text-align left dtextscript img vertical-align middle Wang et al. BMC Plant Biology 2018 18 330 lt br gt https s12870-018-1526-8 lt br gt lt br gt lt br gt lt br gt lt br gt RESEARCH ARTICLE Open Access lt br gt lt br gt Genome-wide characterization and lt br gt phylogenetic analysis of GSK gene family in lt br gt three species of cotton evidence for a role lt br gt of some GSKs in fiber development and lt br gt responses to stress lt br gt Lingling Wang1 2 Zhaoen Yang1 Bin Zhang1 Daoqian Yu1 Ji Liu1 Qian Gong1 Ghulam Qanmber1 Yi Li1 Lili Lu1 lt br gt Yongjun Lin2 Zuoren Yang1 and Fuguang Li1 lt br gt lt br gt lt br gt Abstract lt br gt Background The glycogen synthase kinase 3 shaggy kinase GSK3 is a serine threonine kinase with important lt br gt roles in animals. Although GSK3 genes have been studied for more than 30 years plant GSK genes have been lt br gt studied only since the last decade. Previous research has confirmed that plant GSK genes are involved in diverse lt br gt processes including floral development brassinosteroid signaling and responses to abiotic stresses. lt br gt Result In this study 20 15 including 5 different transcripts and 10 GSK genes were identified in G. hirsutum G. lt br gt raimondii and G. arboreum respectively. A total of 65 genes from Arabidopsis rice and cotton were classified into 4 lt br gt clades. High similarities were found in GSK3 protein sequences conserved motifs and gene structures as well as lt br gt good concordance in gene pairwise comparisons G. hirsutum vs. G. arboreum G. hirsutum vs. G. raimondii and G. lt br gt arboreum vs. G. raimondii were observed. Whole .

• Sinh học
• BMC Plant Biology
• Glycogen synthase kinase 3
• Shaggy kinase
• Genome duplication
• Fiber development
• Abiotic stress
• Co expression network
• Single plant genome wide association study
• Plant height
• Bulk segregant analysis
• Genome wide association studies
• Virus vector host interaction
• Plant defense
• Jasmonic acid
• Plant volatile
• Bemisia tabaci
• Terpenoid indole alkaloid
• Madagascar periwinkle
• Transcription factors
• Plant secondary metabolism
• High throughput sequencing
• Plant stress response
• Chemical library
• Pollen tube
• Growth regulator
• Modulate plant growth
• Community ecology
• Competitive exclusion
• Latitudinal gradients
• Plant–fungus interactions
• Plant–soil feedback
• Biodiversity effects
• Experimental grassland
• Herbivore induced plant volatiles
• Volatile organic compounds
• Herbivore induced plant volatiles
• Solidago altissima
• Eurosta solidaginis
• Plant physiology
• Auxin quantification
• Isotope dilution analysis
• Laser microdissection microscope
• Plant sample preparation
• Minute samples
• Linkage map
• Technical length
• Quantitative trait locus
• Pitcher plant
• DNA barcoding
• Cytochrome oxidase I
• Nepenthes genus
• Bivariate quantiles
• Conditional quantiles
• Joint estimation
• Plant growth
• Stress tolerance
• Mepiquat chloride
• Lateral root
• Plant growth regulator
• Enhances root growth
• Ammonium metabolism
• Arabidopsis thaliana
• Plant defensins
• Amino acids
• Genome wide association study
• Lint percentage
• Boll number per plant
• Boll weight per plant
• Salt stress
• Transcriptome analysis
• Gossypium hirsutum
• Catalpa bungei
• Genetic map
• RAD seq
• QTL mapping
• Leaf traits
• HN09 induced systemic resistance
• Plant immune
• Plant growth promoting rhizobacteria
• Bacillus subtilis HN09
• Plant architecture
• RNA Seq
• Internode elongation
• Plant hormone
• Physic nut
• Arabidopsis TFL1
• Mutants reveals cytokinin
• Woody plant Jatropha curcas
• Sucrose transporters
• Abiotic stress
• ABA signaling pathway
• Stomatal closure
• Tomato plant
• Pathogenesis related gene 1
• Regulatory mechanism
• Transcription factor
• RNA polymerase III
• Plant specific zinc dependent
• DNA binding proteins
• Meta transcriptomics
• Plant abiotic stress
• Plant biotic stress
• Crop physiology
• ABA hypersensitive
• Plant biological
• Including phytohormone homeostasis
• Plant development
• Photosynthetic plant life
• Plants perceive UV B
• Non plant organisms
• Guanine nucleotide exchange factors
• Chromatin immunoprecipitation
• Colletotrichum gloeosporioides
• Induced response
• Plant–pathogen interaction
• Polyphenol oxidase